Oral Presentation Australian Society for Microbiology Annual Scientific Meeting 2021

Urinary isolates from Australian dogs and cats: antimicrobial resistance patterns and implications for empirical therapy   (#105)

Ri Scarborough 1 2 3 , Laura Hardefeldt 1 2 3 , Kirsten Bailey 1 2 3 , Brad Galgut 4 , Adam Williamson 5 , James Gilkerson 1 2 3 , Glenn Browning 1 2 3
  1. Veterinary Biosciences, University of Melbourne, Parkville, VIC, Australia
  2. Asia Pacific Centre for Animal Health, Parkville, VIC, Australia
  3. National Centre for Antimicrobial Stewardship, Parkville, VIC, Australia
  4. ASAP Laboratory, Mulgrave, Vic, Australia
  5. Make Data Useful, Fitzroy, Vic, Australia

Urinary tract infections (UTIs) are commonly treated with empirically selected antimicrobials in veterinary practice. Antimicrobial use guidelines recommend administration of amoxicillin or trimethoprim-sulfonamide (TMS) for 3 to 5 days for UTIs, but the efficacy of these recommendations against urinary tract pathogens found in Australian cats and dogs has not been examined.

We analysed bacterial identification and antimicrobial susceptibility results from bacterial isolates from 5614 cat and dog urine samples between 2015 and 2019, predominantly from first opinion veterinary clinics (78%). E. coli was the most prevalent species, and was isolated from 67% of dog and 55% of cat samples. Enterococcus faecalisStaphylococcus pseudintermedius, Proteus spp., Enterobacter spp., coagulase-negative staphylococci, and Streptococcus canis were also detected commonly. There was relatively little acquired antimicrobial resistance in these isolates, with the exception of a high prevalence of fluoroquinolone resistance in Enterococcus faecalis and Streptococcus canis. Multi-drug resistance was most common in E. coli (9.7%), primarily due to resistance to multiple (non-potentiated) beta-lactam antibiotics, but 84% of these were susceptible to amoxicillin-clavulanate. Using a formula for rational antimicrobial therapy, the most effective empirical antibiotic choice was amoxicillin-clavulanate. However, when isolates were classified based on morphology, amoxicillin was almost as effective as amoxicillin-clavulanate against cocci, and TMS was almost as effective against bacilli, highlighting the value of in-clinic urinary microscopy in selecting empirical therapy, particularly when attempting to improve antimicrobial stewardship in veterinary practice. A novel population analysis was used to combine antimicrobial importance ratings with susceptibility results; findings suggested that when the morphology had not been determined, TMS was the best first-line empirical choice and amoxicillin the best second-line choice.

This study showed favourable antimicrobial susceptibility profiles in dog and cat urinary isolates compared with local human urinary isolates1 and confirmed the current international2 and Australian3 guideline recommendations of TMS or amoxicillin for empirical treatment of sporadic UTIs in dogs and cats.

  1. Australian Commission for Safety and Quality in Healthcare (2019). Antimicrobial Use and Resistance in Australia (AURA) Report, available online at: www.safetyandquality.gov.au/sites/default/files/2019-06/AURA-2019-Report.pdf
  2. Weese JS, Blondeau J, Boothe D, Guardabassi LG, Gumley N, Papich M, Jessen LR, Lappin M, Rankin S, Westropp JL, Sykes J (2019). International Society for Companion Animal Infectious Diseases (ISCAID) guidelines for the diagnosis and management of bacterial urinary tract infections in dogs and cats. Vet J. 2019 May;247:8-25. doi: 10.1016/j.tvjl.2019.02.008. Epub 2019 Feb 26. PMID: 30971357.
  3. University of Melbourne (2019). Australian Veterinary Prescribing Guidelines, Dogs and Cats, version 2, available online at: vetantibiotics.fvas.unimelb.edu.au/about/resources/